PuppetDB can be upgraded independently of your master and agent nodes.
Follow these steps, depending on whether you want to automate upgrade or manually upgrade.
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To automate upgrade, specify the version parameter of the puppetlabs/puppetdb module’s puppetdb::globals class.
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To manually upgrade, on the PuppetDB node, run the command appropriate to your package installer:
Yum:
yum update puppetdb
Apt:
apt-get update apt-get install --only-upgrade puppetdb
Yum:
yum update puppetdb-termini
Apt:
apt-get update apt-get install --only-upgrade puppetdb-termini